Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.13■□□□□ 0.17
Foxa2P35583 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Foxa2P35583 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Foxa2P35583 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.13■□□□□ 0.17
Foxa2P35583 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.13■□□□□ 0.17
Foxa2P35583 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Foxa2P35583 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Foxa2P35583 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Foxa2P35583 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.12■□□□□ 0.17
Foxa2P35583 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.12■□□□□ 0.17
Foxa2P35583 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.12■□□□□ 0.17
Foxa2P35583 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.12■□□□□ 0.17
Foxa2P35583 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Gm13241-201ENSMUST00000094493 780 ntBASIC16.12■□□□□ 0.17
Foxa2P35583 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Foxa2P35583 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Foxa2P35583 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.11■□□□□ 0.17
Foxa2P35583 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Foxa2P35583 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Foxa2P35583 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Foxa2P35583 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.11■□□□□ 0.17
Foxa2P35583 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Foxa2P35583 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Foxa2P35583 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Foxa2P35583 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.1■□□□□ 0.17
Foxa2P35583 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.1■□□□□ 0.17
Foxa2P35583 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Foxa2P35583 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.1■□□□□ 0.17
Foxa2P35583 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.1■□□□□ 0.17
Foxa2P35583 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Foxa2P35583 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.1■□□□□ 0.17
Foxa2P35583 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.09■□□□□ 0.17
Foxa2P35583 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.09■□□□□ 0.17
Foxa2P35583 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.09■□□□□ 0.17
Foxa2P35583 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Foxa2P35583 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Foxa2P35583 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Foxa2P35583 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Foxa2P35583 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Foxa2P35583 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Foxa2P35583 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa2P35583 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa2P35583 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Foxa2P35583 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa2P35583 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa2P35583 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.08■□□□□ 0.16
Foxa2P35583 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Foxa2P35583 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Foxa2P35583 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa2P35583 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Foxa2P35583 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms