Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nedd8P29595 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nedd8P29595 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.81■□□□□ 0.44
Nedd8P29595 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nedd8P29595 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nedd8P29595 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nedd8P29595 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nedd8P29595 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Nedd8P29595 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Nedd8P29595 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nedd8P29595 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nedd8P29595 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Nedd8P29595 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nedd8P29595 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nedd8P29595 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.77■□□□□ 0.44
Nedd8P29595 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.77■□□□□ 0.44
Nedd8P29595 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.77■□□□□ 0.44
Nedd8P29595 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Nedd8P29595 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.77■□□□□ 0.44
Nedd8P29595 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.77■□□□□ 0.44
Nedd8P29595 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nedd8P29595 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nedd8P29595 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nedd8P29595 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nedd8P29595 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nedd8P29595 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.76■□□□□ 0.43
Nedd8P29595 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Nedd8P29595 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nedd8P29595 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nedd8P29595 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Nedd8P29595 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nedd8P29595 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nedd8P29595 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.75■□□□□ 0.43
Nedd8P29595 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.75■□□□□ 0.43
Nedd8P29595 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nedd8P29595 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nedd8P29595 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nedd8P29595 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.74■□□□□ 0.43
Nedd8P29595 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Nedd8P29595 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.74■□□□□ 0.43
Nedd8P29595 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nedd8P29595 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Nedd8P29595 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nedd8P29595 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms