Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Cbx3P23198 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cbx3P23198 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cbx3P23198 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.4■□□□□ 0.38
Cbx3P23198 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Cbx3P23198 Gm14523-201ENSMUST00000117260 558 ntBASIC17.4■□□□□ 0.38
Cbx3P23198 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.4■□□□□ 0.38
Cbx3P23198 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cbx3P23198 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.4■□□□□ 0.38
Cbx3P23198 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cbx3P23198 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.39■□□□□ 0.38
Cbx3P23198 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cbx3P23198 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Gm7332-201ENSMUST00000118351 454 ntBASIC17.39■□□□□ 0.37
Cbx3P23198 Gm27502-201ENSMUST00000183495 199 ntBASIC17.39■□□□□ 0.37
Cbx3P23198 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.39■□□□□ 0.37
Cbx3P23198 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.39■□□□□ 0.37
Cbx3P23198 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cbx3P23198 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cbx3P23198 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.39■□□□□ 0.37
Cbx3P23198 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cbx3P23198 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.37■□□□□ 0.37
Cbx3P23198 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.37■□□□□ 0.37
Cbx3P23198 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cbx3P23198 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.37■□□□□ 0.37
Cbx3P23198 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Cbx3P23198 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cbx3P23198 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.36■□□□□ 0.37
Cbx3P23198 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.36■□□□□ 0.37
Cbx3P23198 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cbx3P23198 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cbx3P23198 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cbx3P23198 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Cbx3P23198 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Cbx3P23198 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.35■□□□□ 0.37
Cbx3P23198 Mir6538-201ENSMUST00000183713 110 ntBASIC17.35■□□□□ 0.37
Cbx3P23198 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.35■□□□□ 0.37
Cbx3P23198 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx3P23198 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx3P23198 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cbx3P23198 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx3P23198 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cbx3P23198 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms