Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.46■■□□□ 1.03
Hoxc6P10629 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Hoxc6P10629 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Hoxc6P10629 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc6P10629 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc6P10629 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc6P10629 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Hoxc6P10629 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.45■■□□□ 1.02
Hoxc6P10629 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.45■■□□□ 1.02
Hoxc6P10629 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Hoxc6P10629 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc6P10629 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc6P10629 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.45■■□□□ 1.02
Hoxc6P10629 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc6P10629 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc6P10629 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.44■■□□□ 1.02
Hoxc6P10629 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Hoxc6P10629 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc6P10629 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc6P10629 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc6P10629 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc6P10629 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc6P10629 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.44■■□□□ 1.02
Hoxc6P10629 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.43■■□□□ 1.02
Hoxc6P10629 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc6P10629 Mir7071-201ENSMUST00000184847 69 ntBASIC21.43■■□□□ 1.02
Hoxc6P10629 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hoxc6P10629 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc6P10629 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.42■■□□□ 1.02
Hoxc6P10629 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.42■■□□□ 1.02
Hoxc6P10629 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Hoxc6P10629 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Hoxc6P10629 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc6P10629 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.41■■□□□ 1.02
Hoxc6P10629 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc6P10629 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc6P10629 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc6P10629 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Hoxc6P10629 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.4■■□□□ 1.02
Hoxc6P10629 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc6P10629 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Hoxc6P10629 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc6P10629 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Hoxc6P10629 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc6P10629 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc6P10629 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Hoxc6P10629 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.39■■□□□ 1.01
Hoxc6P10629 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.39■■□□□ 1.01
Hoxc6P10629 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc6P10629 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc6P10629 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc6P10629 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc6P10629 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.38■■□□□ 1.01
Hoxc6P10629 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc6P10629 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.37■■□□□ 1.01
Hoxc6P10629 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.37■■□□□ 1.01
Hoxc6P10629 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc6P10629 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.37■■□□□ 1.01
Hoxc6P10629 Gm27275-201ENSMUST00000184318 272 ntBASIC21.37■■□□□ 1.01
Hoxc6P10629 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc6P10629 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Hoxc6P10629 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Hoxc6P10629 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc6P10629 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc6P10629 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc6P10629 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 536.7 ms