Protein–RNA interactions for Protein: P0DM65

Becn2, Beclin-2, mousemouse

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn2P0DM65 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Becn2P0DM65 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Becn2P0DM65 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Becn2P0DM65 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Becn2P0DM65 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.09■□□□□ 0.81
Becn2P0DM65 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn2P0DM65 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.09■□□□□ 0.81
Becn2P0DM65 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn2P0DM65 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn2P0DM65 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Becn2P0DM65 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Becn2P0DM65 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Becn2P0DM65 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Becn2P0DM65 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.08■□□□□ 0.81
Becn2P0DM65 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Becn2P0DM65 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.07■□□□□ 0.8
Becn2P0DM65 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Becn2P0DM65 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Becn2P0DM65 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Becn2P0DM65 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn2P0DM65 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.07■□□□□ 0.8
Becn2P0DM65 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn2P0DM65 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn2P0DM65 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn2P0DM65 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn2P0DM65 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.07■□□□□ 0.8
Becn2P0DM65 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn2P0DM65 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Becn2P0DM65 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Becn2P0DM65 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.06■□□□□ 0.8
Becn2P0DM65 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.06■□□□□ 0.8
Becn2P0DM65 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Becn2P0DM65 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn2P0DM65 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn2P0DM65 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn2P0DM65 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Becn2P0DM65 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.05■□□□□ 0.8
Becn2P0DM65 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.05■□□□□ 0.8
Becn2P0DM65 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.05■□□□□ 0.8
Becn2P0DM65 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.04■□□□□ 0.8
Becn2P0DM65 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn2P0DM65 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn2P0DM65 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Becn2P0DM65 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.04■□□□□ 0.8
Becn2P0DM65 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.04■□□□□ 0.8
Becn2P0DM65 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn2P0DM65 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.04■□□□□ 0.8
Becn2P0DM65 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Becn2P0DM65 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Becn2P0DM65 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Becn2P0DM65 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.03■□□□□ 0.8
Becn2P0DM65 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.03■□□□□ 0.8
Becn2P0DM65 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Becn2P0DM65 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Becn2P0DM65 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Becn2P0DM65 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Becn2P0DM65 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Becn2P0DM65 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Becn2P0DM65 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.02■□□□□ 0.8
Becn2P0DM65 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Becn2P0DM65 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Becn2P0DM65 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Becn2P0DM65 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Becn2P0DM65 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Becn2P0DM65 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms