Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pdlim3O70209 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Pdlim3O70209 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.39■□□□□ 0.37
Pdlim3O70209 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.39■□□□□ 0.37
Pdlim3O70209 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.39■□□□□ 0.37
Pdlim3O70209 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim3O70209 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.38■□□□□ 0.37
Pdlim3O70209 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pdlim3O70209 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.38■□□□□ 0.37
Pdlim3O70209 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim3O70209 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.37■□□□□ 0.37
Pdlim3O70209 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pdlim3O70209 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.37■□□□□ 0.37
Pdlim3O70209 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pdlim3O70209 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim3O70209 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pdlim3O70209 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.36■□□□□ 0.37
Pdlim3O70209 Gm15820-201ENSMUST00000201566 728 ntBASIC17.36■□□□□ 0.37
Pdlim3O70209 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.36■□□□□ 0.37
Pdlim3O70209 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pdlim3O70209 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pdlim3O70209 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim3O70209 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pdlim3O70209 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pdlim3O70209 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.35■□□□□ 0.37
Pdlim3O70209 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Pdlim3O70209 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim3O70209 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.34■□□□□ 0.37
Pdlim3O70209 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.34■□□□□ 0.37
Pdlim3O70209 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim3O70209 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim3O70209 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim3O70209 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim3O70209 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Pdlim3O70209 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim3O70209 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim3O70209 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim3O70209 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim3O70209 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pdlim3O70209 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pdlim3O70209 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pdlim3O70209 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pdlim3O70209 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim3O70209 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim3O70209 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim3O70209 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim3O70209 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Pdlim3O70209 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.33■□□□□ 0.36
Pdlim3O70209 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pdlim3O70209 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms