Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gfra3O35118 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gfra3O35118 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Gfra3O35118 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gfra3O35118 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.57■□□□□ 0.24
Gfra3O35118 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gfra3O35118 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Gfra3O35118 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
Gfra3O35118 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Gfra3O35118 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gfra3O35118 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.56■□□□□ 0.24
Gfra3O35118 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.56■□□□□ 0.24
Gfra3O35118 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.56■□□□□ 0.24
Gfra3O35118 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gfra3O35118 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gfra3O35118 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.55■□□□□ 0.24
Gfra3O35118 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Gfra3O35118 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.55■□□□□ 0.24
Gfra3O35118 Gm38205-201ENSMUST00000192243 258 ntBASIC16.55■□□□□ 0.24
Gfra3O35118 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.55■□□□□ 0.24
Gfra3O35118 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Gfra3O35118 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.55■□□□□ 0.24
Gfra3O35118 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gfra3O35118 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gfra3O35118 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.54■□□□□ 0.24
Gfra3O35118 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Gfra3O35118 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.54■□□□□ 0.24
Gfra3O35118 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.54■□□□□ 0.24
Gfra3O35118 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gfra3O35118 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gfra3O35118 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Gfra3O35118 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Gfra3O35118 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.53■□□□□ 0.24
Gfra3O35118 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gfra3O35118 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gfra3O35118 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gfra3O35118 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Gfra3O35118 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Gfra3O35118 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.53■□□□□ 0.24
Gfra3O35118 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.52■□□□□ 0.24
Gfra3O35118 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Gfra3O35118 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Gfra3O35118 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gfra3O35118 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Gfra3O35118 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gfra3O35118 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gfra3O35118 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.52■□□□□ 0.24
Gfra3O35118 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.52■□□□□ 0.24
Gfra3O35118 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Gfra3O35118 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Gfra3O35118 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.51■□□□□ 0.23
Gfra3O35118 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gfra3O35118 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms