Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trove2O08848 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trove2O08848 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trove2O08848 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trove2O08848 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trove2O08848 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trove2O08848 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trove2O08848 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.6■□□□□ 0.73
Trove2O08848 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Trove2O08848 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trove2O08848 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trove2O08848 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trove2O08848 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trove2O08848 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trove2O08848 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trove2O08848 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Trove2O08848 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.59■□□□□ 0.73
Trove2O08848 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.59■□□□□ 0.73
Trove2O08848 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.59■□□□□ 0.73
Trove2O08848 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Trove2O08848 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trove2O08848 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trove2O08848 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trove2O08848 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trove2O08848 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trove2O08848 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trove2O08848 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trove2O08848 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Trove2O08848 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trove2O08848 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trove2O08848 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trove2O08848 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trove2O08848 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.57■□□□□ 0.72
Trove2O08848 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Trove2O08848 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.57■□□□□ 0.72
Trove2O08848 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.57■□□□□ 0.72
Trove2O08848 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Trove2O08848 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trove2O08848 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
Trove2O08848 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.56■□□□□ 0.72
Trove2O08848 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Trove2O08848 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.56■□□□□ 0.72
Trove2O08848 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trove2O08848 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trove2O08848 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trove2O08848 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.56■□□□□ 0.72
Trove2O08848 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trove2O08848 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Trove2O08848 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trove2O08848 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.55■□□□□ 0.72
Trove2O08848 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.55■□□□□ 0.72
Trove2O08848 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Trove2O08848 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trove2O08848 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trove2O08848 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trove2O08848 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trove2O08848 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trove2O08848 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trove2O08848 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trove2O08848 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms