Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top6blJ3QMY9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top6blJ3QMY9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Top6blJ3QMY9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Top6blJ3QMY9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top6blJ3QMY9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top6blJ3QMY9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Gm10849-201ENSMUST00000100397 618 ntBASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.18■□□□□ 0.82
Top6blJ3QMY9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top6blJ3QMY9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top6blJ3QMY9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Top6blJ3QMY9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 Gm13146-201ENSMUST00000118508 780 ntBASIC20.15■□□□□ 0.82
Top6blJ3QMY9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top6blJ3QMY9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Top6blJ3QMY9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top6blJ3QMY9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top6blJ3QMY9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 Golph3-202ENSMUST00000226517 2359 ntBASIC20.12■□□□□ 0.81
Top6blJ3QMY9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 AV356131-201ENSMUST00000206201 750 ntBASIC20.12■□□□□ 0.81
Top6blJ3QMY9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Top6blJ3QMY9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top6blJ3QMY9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Top6blJ3QMY9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Top6blJ3QMY9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.11■□□□□ 0.81
Top6blJ3QMY9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top6blJ3QMY9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top6blJ3QMY9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms