Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.25■□□□□ 0.99
TMX2-CTNND1H3BSU7 AC004911.1-201ENST00000416316 871 ntBASIC21.25■□□□□ 0.99
TMX2-CTNND1H3BSU7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TMX2-CTNND1H3BSU7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMX2-CTNND1H3BSU7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.23■□□□□ 0.99
TMX2-CTNND1H3BSU7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 AC068587.7-201ENST00000641602 218 ntBASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.22■□□□□ 0.99
TMX2-CTNND1H3BSU7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMX2-CTNND1H3BSU7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TMX2-CTNND1H3BSU7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 ID1-201ENST00000376105 1233 ntBASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.19■□□□□ 0.98
TMX2-CTNND1H3BSU7 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms