Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm8879F6R3J9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm8879F6R3J9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm8879F6R3J9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm8879F6R3J9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm8879F6R3J9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm8879F6R3J9 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.33■□□□□ 0.53
Gm8879F6R3J9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm8879F6R3J9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm8879F6R3J9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm8879F6R3J9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Gm15546-201ENSMUST00000122095 826 ntBASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Gm5812-201ENSMUST00000061073 957 ntBASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Gm8879F6R3J9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm8879F6R3J9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm8879F6R3J9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm8879F6R3J9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gm8879F6R3J9 Gm22238-201ENSMUST00000175222 88 ntBASIC18.29■□□□□ 0.52
Gm8879F6R3J9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.29■□□□□ 0.52
Gm8879F6R3J9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Gm8879F6R3J9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm8879F6R3J9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gm8879F6R3J9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm8879F6R3J9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm8879F6R3J9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm8879F6R3J9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm8879F6R3J9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.27■□□□□ 0.52
Gm8879F6R3J9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm8879F6R3J9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm8879F6R3J9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm8879F6R3J9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm8879F6R3J9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm8879F6R3J9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm8879F6R3J9 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm8879F6R3J9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm8879F6R3J9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm8879F6R3J9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.25■□□□□ 0.51
Gm8879F6R3J9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms