Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Krt28A6BLY7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Krt28A6BLY7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Gm37055-201ENSMUST00000191866 133 ntBASIC21.41■■□□□ 1.02
Krt28A6BLY7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Krt28A6BLY7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.4■■□□□ 1.02
Krt28A6BLY7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.4■■□□□ 1.02
Krt28A6BLY7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
Krt28A6BLY7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Krt28A6BLY7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Krt28A6BLY7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Krt28A6BLY7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.39■■□□□ 1.01
Krt28A6BLY7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Krt28A6BLY7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Gm15378-201ENSMUST00000121894 207 ntBASIC21.38■■□□□ 1.01
Krt28A6BLY7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Krt28A6BLY7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.37■■□□□ 1.01
Krt28A6BLY7 Gm11249-201ENSMUST00000117071 859 ntBASIC21.37■■□□□ 1.01
Krt28A6BLY7 Gm10698-201ENSMUST00000182663 604 ntBASIC21.37■■□□□ 1.01
Krt28A6BLY7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Krt28A6BLY7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.36■■□□□ 1.01
Krt28A6BLY7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Krt28A6BLY7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krt28A6BLY7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Krt28A6BLY7 Mir1199-201ENSMUST00000117015 119 ntBASIC21.35■■□□□ 1.01
Krt28A6BLY7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Krt28A6BLY7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Krt28A6BLY7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Krt28A6BLY7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.35■■□□□ 1.01
Krt28A6BLY7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Krt28A6BLY7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms