Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.46■□□□□ 0.71
Gm5640A3KG49 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm5640A3KG49 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5640A3KG49 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm5640A3KG49 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5640A3KG49 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm5640A3KG49 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm5640A3KG49 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.45■□□□□ 0.7
Gm5640A3KG49 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm5640A3KG49 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.44■□□□□ 0.7
Gm5640A3KG49 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.44■□□□□ 0.7
Gm5640A3KG49 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm5640A3KG49 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm5640A3KG49 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 AA386476-201ENSMUST00000098781 1665 ntBASIC19.43■□□□□ 0.7
Gm5640A3KG49 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.43■□□□□ 0.7
Gm5640A3KG49 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.43■□□□□ 0.7
Gm5640A3KG49 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm5640A3KG49 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.41■□□□□ 0.7
Gm5640A3KG49 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.41■□□□□ 0.7
Gm5640A3KG49 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.41■□□□□ 0.7
Gm5640A3KG49 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Gm5640A3KG49 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms