Protein–RNA interactions for Protein: A0A1B0GSM6

Gm13539, Predicted gene 13539, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm13539A0A1B0GSM6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.75■□□□□ 0.43
Gm13539A0A1B0GSM6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Gm12251-201ENSMUST00000117893 792 ntBASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm13539A0A1B0GSM6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm13539A0A1B0GSM6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Gm13241-201ENSMUST00000094493 780 ntBASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm13539A0A1B0GSM6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm13539A0A1B0GSM6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Gm21956-201ENSMUST00000179946 522 ntBASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm13539A0A1B0GSM6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm13539A0A1B0GSM6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm13539A0A1B0GSM6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms