Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9d-4A0A0G2JG37 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav9d-4A0A0G2JG37 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav9d-4A0A0G2JG37 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav9d-4A0A0G2JG37 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trav9d-4A0A0G2JG37 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.14□□□□□ -0.31
Trav9d-4A0A0G2JG37 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-4A0A0G2JG37 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-4A0A0G2JG37 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Gm45444-201ENSMUST00000211394 898 ntBASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-4A0A0G2JG37 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-4A0A0G2JG37 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms