Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4-3A0A0B4J1K1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav4-3A0A0B4J1K1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4-3A0A0B4J1K1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4-3A0A0B4J1K1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav4-3A0A0B4J1K1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4-3A0A0B4J1K1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4-3A0A0B4J1K1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav4-3A0A0B4J1K1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav4-3A0A0B4J1K1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav4-3A0A0B4J1K1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Trav4-3A0A0B4J1K1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav4-3A0A0B4J1K1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms