Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tcrg-V4A0A0B4J1J8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms