Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv3A0A0A6YYE2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv3A0A0A6YYE2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv3A0A0A6YYE2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.79□□□□□ -0.04
Trbv3A0A0A6YYE2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv3A0A0A6YYE2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv3A0A0A6YYE2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.77□□□□□ -0.05
Trbv3A0A0A6YYE2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv3A0A0A6YYE2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv3A0A0A6YYE2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv3A0A0A6YYE2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv3A0A0A6YYE2 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trbv3A0A0A6YYE2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv3A0A0A6YYE2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms