Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv6-4A0A0A6YX19 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv6-4A0A0A6YX19 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv6-4A0A0A6YX19 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv6-4A0A0A6YX19 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv6-4A0A0A6YX19 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv6-4A0A0A6YX19 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
Ighv6-4A0A0A6YX19 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv6-4A0A0A6YX19 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv6-4A0A0A6YX19 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Gm14523-201ENSMUST00000117260 558 ntBASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv6-4A0A0A6YX19 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv6-4A0A0A6YX19 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms