Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav12d-3A0A075B6A4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav12d-3A0A075B6A4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav12d-3A0A075B6A4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav12d-3A0A075B6A4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav12d-3A0A075B6A4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav12d-3A0A075B6A4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav12d-3A0A075B6A4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav12d-3A0A075B6A4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms