Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh20Q9Z0M3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh20Q9Z0M3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh20Q9Z0M3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Iqck-206ENSMUST00000208658 2891 ntBASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Gm8493-201ENSMUST00000196881 489 ntBASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh20Q9Z0M3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.8■□□□□ 0.44
Cdh20Q9Z0M3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cdh20Q9Z0M3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh20Q9Z0M3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.79■□□□□ 0.44
Cdh20Q9Z0M3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh20Q9Z0M3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdh20Q9Z0M3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cdh20Q9Z0M3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Smad6-203ENSMUST00000179458 273 ntBASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cdh20Q9Z0M3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Gm43173-201ENSMUST00000202246 593 ntBASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cdh20Q9Z0M3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Cdh20Q9Z0M3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.77■□□□□ 0.43
Cdh20Q9Z0M3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cdh20Q9Z0M3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Gm45417-201ENSMUST00000209533 758 ntBASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cdh20Q9Z0M3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Gm6139-201ENSMUST00000079261 882 ntBASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cdh20Q9Z0M3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cdh20Q9Z0M3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh20Q9Z0M3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cdh20Q9Z0M3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Cdh20Q9Z0M3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms