Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rfx5Q9JL61 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Reep4-203ENSMUST00000226563 1444 ntBASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Gm9988-201ENSMUST00000069786 435 ntBASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rfx5Q9JL61 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rfx5Q9JL61 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rfx5Q9JL61 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rfx5Q9JL61 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.44■□□□□ 0.86
Rfx5Q9JL61 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Gm38205-201ENSMUST00000192243 258 ntBASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx5Q9JL61 Gm26571-201ENSMUST00000181399 666 ntBASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Gm10033-202ENSMUST00000211874 928 ntBASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx5Q9JL61 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Gm7860-201ENSMUST00000121190 879 ntBASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rfx5Q9JL61 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Gm42642-201ENSMUST00000200683 355 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms