Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm18671-201ENSMUST00000214826 683 ntBASIC17.83■□□□□ 0.44
Rita1Q9D1H0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rita1Q9D1H0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rita1Q9D1H0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.82■□□□□ 0.44
Rita1Q9D1H0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 AV356131-201ENSMUST00000206201 750 ntBASIC17.81■□□□□ 0.44
Rita1Q9D1H0 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rita1Q9D1H0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rita1Q9D1H0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.79■□□□□ 0.44
Rita1Q9D1H0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rita1Q9D1H0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Gm7291-201ENSMUST00000199147 382 ntBASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rita1Q9D1H0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rita1Q9D1H0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rita1Q9D1H0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rita1Q9D1H0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rita1Q9D1H0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Gm27405-201ENSMUST00000184201 112 ntBASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms