Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn1Q9CWM4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pfdn1Q9CWM4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.02■□□□□ 0.31
Pfdn1Q9CWM4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.02■□□□□ 0.31
Pfdn1Q9CWM4 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pfdn1Q9CWM4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pfdn1Q9CWM4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pfdn1Q9CWM4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Fst-202ENSMUST00000223640 2612 ntBASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pfdn1Q9CWM4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pfdn1Q9CWM4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pfdn1Q9CWM4 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn1Q9CWM4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn1Q9CWM4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn1Q9CWM4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pfdn1Q9CWM4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pfdn1Q9CWM4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms