Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.83■□□□□ 0.45
Q9CR55 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q9CR55 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q9CR55 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Q9CR55 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q9CR55 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q9CR55 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.83■□□□□ 0.44
Q9CR55 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.83■□□□□ 0.44
Q9CR55 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q9CR55 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Q9CR55 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Q9CR55 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.82■□□□□ 0.44
Q9CR55 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Q9CR55 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.82■□□□□ 0.44
Q9CR55 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Q9CR55 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.82■□□□□ 0.44
Q9CR55 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.81■□□□□ 0.44
Q9CR55 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Q9CR55 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Q9CR55 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Q9CR55 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.8■□□□□ 0.44
Q9CR55 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q9CR55 Gm5921-201ENSMUST00000075898 882 ntBASIC17.8■□□□□ 0.44
Q9CR55 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q9CR55 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q9CR55 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q9CR55 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Q9CR55 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.79■□□□□ 0.44
Q9CR55 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Q9CR55 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Q9CR55 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Q9CR55 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Q9CR55 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Q9CR55 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Q9CR55 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Q9CR55 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Q9CR55 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Q9CR55 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Q9CR55 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q9CR55 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Q9CR55 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q9CR55 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.78■□□□□ 0.44
Q9CR55 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Q9CR55 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Q9CR55 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q9CR55 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q9CR55 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q9CR55 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Q9CR55 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q9CR55 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Q9CR55 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Q9CR55 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Q9CR55 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q9CR55 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q9CR55 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.77■□□□□ 0.43
Q9CR55 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q9CR55 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Q9CR55 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.76■□□□□ 0.43
Q9CR55 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Q9CR55 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CR55 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Q9CR55 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CR55 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CR55 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CR55 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Q9CR55 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms