Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rer1Q9CQU3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rer1Q9CQU3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.74■□□□□ 0.11
Rer1Q9CQU3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rer1Q9CQU3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rer1Q9CQU3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rer1Q9CQU3 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.73■□□□□ 0.11
Rer1Q9CQU3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rer1Q9CQU3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rer1Q9CQU3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rer1Q9CQU3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rer1Q9CQU3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rer1Q9CQU3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rer1Q9CQU3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rer1Q9CQU3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rer1Q9CQU3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Rer1Q9CQU3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rer1Q9CQU3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rer1Q9CQU3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rer1Q9CQU3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Rer1Q9CQU3 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.68■□□□□ 0.1
Rer1Q9CQU3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rer1Q9CQU3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rer1Q9CQU3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms