Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.69■□□□□ 0.74
Trem2Q99NH8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trem2Q99NH8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trem2Q99NH8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.68■□□□□ 0.74
Trem2Q99NH8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trem2Q99NH8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trem2Q99NH8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trem2Q99NH8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trem2Q99NH8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Gm27454-201ENSMUST00000185090 204 ntBASIC19.65■□□□□ 0.74
Trem2Q99NH8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trem2Q99NH8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trem2Q99NH8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trem2Q99NH8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trem2Q99NH8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Gm8493-201ENSMUST00000196881 489 ntBASIC19.64■□□□□ 0.73
Trem2Q99NH8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.64■□□□□ 0.73
Trem2Q99NH8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.64■□□□□ 0.73
Trem2Q99NH8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Trem2Q99NH8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trem2Q99NH8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trem2Q99NH8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trem2Q99NH8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trem2Q99NH8 Gm11421-201ENSMUST00000122124 294 ntBASIC19.63■□□□□ 0.73
Trem2Q99NH8 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trem2Q99NH8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trem2Q99NH8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trem2Q99NH8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trem2Q99NH8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms