Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Thumpd1Q99J36 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.17■□□□□ 0.34
Thumpd1Q99J36 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Thumpd1Q99J36 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Thumpd1Q99J36 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Thumpd1Q99J36 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Thumpd1Q99J36 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Thumpd1Q99J36 Cap2-205ENSMUST00000225824 1634 ntBASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Thumpd1Q99J36 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Thumpd1Q99J36 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.12■□□□□ 0.33
Thumpd1Q99J36 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.12■□□□□ 0.33
Thumpd1Q99J36 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Thumpd1Q99J36 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms