Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb8Q91XZ2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb8Q91XZ2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb8Q91XZ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb8Q91XZ2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb8Q91XZ2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Gm12821-201ENSMUST00000120022 600 ntBASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb8Q91XZ2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb8Q91XZ2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Gm27454-201ENSMUST00000185090 204 ntBASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb8Q91XZ2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms