Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lmcd1Q8VEE1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Lmcd1Q8VEE1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lmcd1Q8VEE1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lmcd1Q8VEE1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lmcd1Q8VEE1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.65■□□□□ 0.9
Lmcd1Q8VEE1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lmcd1Q8VEE1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lmcd1Q8VEE1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Gm10698-201ENSMUST00000182663 604 ntBASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lmcd1Q8VEE1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Gm15378-201ENSMUST00000121894 207 ntBASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lmcd1Q8VEE1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.62■□□□□ 0.89
Lmcd1Q8VEE1 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
Lmcd1Q8VEE1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lmcd1Q8VEE1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lmcd1Q8VEE1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms