Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC29.04■■■□□ 2.24
Abca8bQ8K440 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Abca8bQ8K440 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Abca8bQ8K440 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Abca8bQ8K440 AL672049.1-201ENSMUST00000197943 91 ntBASIC29.03■■■□□ 2.24
Abca8bQ8K440 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Abca8bQ8K440 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Abca8bQ8K440 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC29.03■■■□□ 2.24
Abca8bQ8K440 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Abca8bQ8K440 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC29.03■■■□□ 2.24
Abca8bQ8K440 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Abca8bQ8K440 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Abca8bQ8K440 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Abca8bQ8K440 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC29.02■■■□□ 2.24
Abca8bQ8K440 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC29.02■■■□□ 2.24
Abca8bQ8K440 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Abca8bQ8K440 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Abca8bQ8K440 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Abca8bQ8K440 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Abca8bQ8K440 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC29■■■□□ 2.23
Abca8bQ8K440 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
Abca8bQ8K440 Cdkn3-203ENSMUST00000227149 1952 ntBASIC29■■■□□ 2.23
Abca8bQ8K440 Gm6802-201ENSMUST00000167843 1983 ntBASIC28.99■■■□□ 2.23
Abca8bQ8K440 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC28.99■■■□□ 2.23
Abca8bQ8K440 AC154649.1-201ENSMUST00000227392 384 ntBASIC28.99■■■□□ 2.23
Abca8bQ8K440 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Abca8bQ8K440 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Abca8bQ8K440 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Abca8bQ8K440 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Abca8bQ8K440 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Abca8bQ8K440 Mir1199-201ENSMUST00000117015 119 ntBASIC28.98■■■□□ 2.23
Abca8bQ8K440 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Abca8bQ8K440 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC28.98■■■□□ 2.23
Abca8bQ8K440 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Abca8bQ8K440 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Abca8bQ8K440 Gm26766-202ENSMUST00000227544 2347 ntBASIC28.96■■■□□ 2.23
Abca8bQ8K440 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Abca8bQ8K440 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
Abca8bQ8K440 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC28.96■■■□□ 2.23
Abca8bQ8K440 Gm18666-201ENSMUST00000190039 958 ntBASIC28.96■■■□□ 2.23
Abca8bQ8K440 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Abca8bQ8K440 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC28.96■■■□□ 2.23
Abca8bQ8K440 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Abca8bQ8K440 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Abca8bQ8K440 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC28.95■■■□□ 2.23
Abca8bQ8K440 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
Abca8bQ8K440 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.23
Abca8bQ8K440 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Abca8bQ8K440 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Abca8bQ8K440 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Gm2399-201ENSMUST00000104944 225 ntBASIC28.94■■■□□ 2.22
Abca8bQ8K440 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Gm44549-201ENSMUST00000208351 577 ntBASIC28.94■■■□□ 2.22
Abca8bQ8K440 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Abca8bQ8K440 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC28.93■■■□□ 2.22
Abca8bQ8K440 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
Abca8bQ8K440 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Abca8bQ8K440 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
Abca8bQ8K440 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Abca8bQ8K440 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Abca8bQ8K440 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Abca8bQ8K440 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Abca8bQ8K440 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC28.91■■■□□ 2.22
Abca8bQ8K440 Mir5122-201ENSMUST00000175004 89 ntBASIC28.91■■■□□ 2.22
Abca8bQ8K440 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Abca8bQ8K440 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Abca8bQ8K440 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Abca8bQ8K440 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms