Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hist3h2bbQ8CGP0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hist3h2bbQ8CGP0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hist3h2bbQ8CGP0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hist3h2bbQ8CGP0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hist3h2bbQ8CGP0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hist3h2bbQ8CGP0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.71□□□□□ -0.06
Hist3h2bbQ8CGP0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hist3h2bbQ8CGP0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hist3h2bbQ8CGP0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Hist3h2bbQ8CGP0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Hist3h2bbQ8CGP0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Hist3h2bbQ8CGP0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist3h2bbQ8CGP0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms