Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.39■□□□□ 0.86
Rp1l1Q8CGM2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rp1l1Q8CGM2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rp1l1Q8CGM2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Rp1l1Q8CGM2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rp1l1Q8CGM2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rp1l1Q8CGM2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rp1l1Q8CGM2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rp1l1Q8CGM2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Gm11249-201ENSMUST00000117071 859 ntBASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rp1l1Q8CGM2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Rp1l1Q8CGM2 Mir1199-201ENSMUST00000117015 119 ntBASIC20.33■□□□□ 0.85
Rp1l1Q8CGM2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1l1Q8CGM2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rp1l1Q8CGM2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rp1l1Q8CGM2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rp1l1Q8CGM2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rp1l1Q8CGM2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Rp1l1Q8CGM2 Gm11643-201ENSMUST00000119578 864 ntBASIC20.33■□□□□ 0.84
Rp1l1Q8CGM2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Rp1l1Q8CGM2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rp1l1Q8CGM2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms