Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc38Q8CDN8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc38Q8CDN8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc38Q8CDN8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc38Q8CDN8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Gm13241-201ENSMUST00000094493 780 ntBASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc38Q8CDN8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Gm12251-201ENSMUST00000117893 792 ntBASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc38Q8CDN8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc38Q8CDN8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc38Q8CDN8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc38Q8CDN8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
Ccdc38Q8CDN8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.33■■□□□ 1.01
Ccdc38Q8CDN8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.33■■□□□ 1.01
Ccdc38Q8CDN8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ccdc38Q8CDN8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc38Q8CDN8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ccdc38Q8CDN8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc38Q8CDN8 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.33■■□□□ 1
Ccdc38Q8CDN8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc38Q8CDN8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccdc38Q8CDN8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc38Q8CDN8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc38Q8CDN8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.29■■□□□ 1
Ccdc38Q8CDN8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc38Q8CDN8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc38Q8CDN8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ccdc38Q8CDN8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc38Q8CDN8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms