Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.3■□□□□ 0.2
Rnf170Q8CBG9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf170Q8CBG9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Gm12922-201ENSMUST00000120626 809 ntBASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf170Q8CBG9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf170Q8CBG9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf170Q8CBG9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf170Q8CBG9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf170Q8CBG9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rnf170Q8CBG9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf170Q8CBG9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf170Q8CBG9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Golgb1-201ENSMUST00000023534 498 ntBASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf170Q8CBG9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf170Q8CBG9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Gm9847-201ENSMUST00000052528 599 ntBASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf170Q8CBG9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf170Q8CBG9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf170Q8CBG9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms