Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.47■□□□□ 0.39
Col6a6Q8C6K9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.47■□□□□ 0.39
Col6a6Q8C6K9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a6Q8C6K9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a6Q8C6K9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Col6a6Q8C6K9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col6a6Q8C6K9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.45■□□□□ 0.38
Col6a6Q8C6K9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col6a6Q8C6K9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col6a6Q8C6K9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col6a6Q8C6K9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.41■□□□□ 0.38
Col6a6Q8C6K9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.4■□□□□ 0.38
Col6a6Q8C6K9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col6a6Q8C6K9 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col6a6Q8C6K9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms