Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ptpn7Q8BUM3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ptpn7Q8BUM3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ptpn7Q8BUM3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ptpn7Q8BUM3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ptpn7Q8BUM3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ptpn7Q8BUM3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ptpn7Q8BUM3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ptpn7Q8BUM3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptpn7Q8BUM3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptpn7Q8BUM3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptpn7Q8BUM3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ptpn7Q8BUM3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ptpn7Q8BUM3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms