Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ppp1r3eQ8BRJ4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ppp1r3eQ8BRJ4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ppp1r3eQ8BRJ4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Ppp1r3eQ8BRJ4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ppp1r3eQ8BRJ4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Ppp1r3eQ8BRJ4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.04■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ppp1r3eQ8BRJ4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ppp1r3eQ8BRJ4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ppp1r3eQ8BRJ4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Ppp1r3eQ8BRJ4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ppp1r3eQ8BRJ4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ppp1r3eQ8BRJ4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ppp1r3eQ8BRJ4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.02■□□□□ 0.47
Ppp1r3eQ8BRJ4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ppp1r3eQ8BRJ4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.01■□□□□ 0.47
Ppp1r3eQ8BRJ4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms