Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdh20Q8BIZ0 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh20Q8BIZ0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Mir7075-201ENSMUST00000184187 82 ntBASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh20Q8BIZ0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh20Q8BIZ0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh20Q8BIZ0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Gm6139-201ENSMUST00000079261 882 ntBASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh20Q8BIZ0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdh20Q8BIZ0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Serp2-204ENSMUST00000228055 705 ntBASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh20Q8BIZ0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh20Q8BIZ0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms