Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Slc5a7Q8BGY9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Slc5a7Q8BGY9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.89■□□□□ 0.29
Slc5a7Q8BGY9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.88■□□□□ 0.29
Slc5a7Q8BGY9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc5a7Q8BGY9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc5a7Q8BGY9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Slc5a7Q8BGY9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Gm10399-202ENSMUST00000202768 748 ntBASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc5a7Q8BGY9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms