Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 Gm6139-201ENSMUST00000079261 882 ntBASIC22.54■■□□□ 1.2
Samm50Q8BGH2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Samm50Q8BGH2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Samm50Q8BGH2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Samm50Q8BGH2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Samm50Q8BGH2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC22.53■■□□□ 1.2
Samm50Q8BGH2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Gm8493-201ENSMUST00000196881 489 ntBASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Samm50Q8BGH2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Samm50Q8BGH2 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.51■■□□□ 1.19
Samm50Q8BGH2 Serp2-204ENSMUST00000228055 705 ntBASIC22.51■■□□□ 1.19
Samm50Q8BGH2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Samm50Q8BGH2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Samm50Q8BGH2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Mir6236-201ENSMUST00000184437 123 ntBASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Samm50Q8BGH2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Samm50Q8BGH2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Samm50Q8BGH2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Wdr70-203ENSMUST00000227371 1130 ntBASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Samm50Q8BGH2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.46■■□□□ 1.19
Samm50Q8BGH2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Samm50Q8BGH2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Samm50Q8BGH2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Gm43017-201ENSMUST00000198296 752 ntBASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.45■■□□□ 1.18
Samm50Q8BGH2 Gm12251-201ENSMUST00000117893 792 ntBASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Spcs1-204ENSMUST00000226782 949 ntBASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Samm50Q8BGH2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms