Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim6Q8BGE7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.4■□□□□ 0.86
Trim6Q8BGE7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim6Q8BGE7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim6Q8BGE7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.39■□□□□ 0.86
Trim6Q8BGE7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim6Q8BGE7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim6Q8BGE7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim6Q8BGE7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim6Q8BGE7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim6Q8BGE7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim6Q8BGE7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms