Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Nucks1Q80XU3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nucks1Q80XU3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Serp2-204ENSMUST00000228055 705 ntBASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nucks1Q80XU3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nucks1Q80XU3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nucks1Q80XU3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nucks1Q80XU3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nucks1Q80XU3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nucks1Q80XU3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nucks1Q80XU3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nucks1Q80XU3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nucks1Q80XU3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms