Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.93■□□□□ 0.94
Ctdp1Q7TSG2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ctdp1Q7TSG2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ctdp1Q7TSG2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ctdp1Q7TSG2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Ctdp1Q7TSG2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ctdp1Q7TSG2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ctdp1Q7TSG2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctdp1Q7TSG2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ctdp1Q7TSG2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ctdp1Q7TSG2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ctdp1Q7TSG2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Gm43530-201ENSMUST00000195920 274 ntBASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ctdp1Q7TSG2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ctdp1Q7TSG2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms