Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sp140Q6NSQ5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sp140Q6NSQ5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sp140Q6NSQ5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sp140Q6NSQ5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sp140Q6NSQ5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Sp140Q6NSQ5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Golph3-205ENSMUST00000228671 2842 ntBASIC19.55■□□□□ 0.72
Sp140Q6NSQ5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sp140Q6NSQ5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Mir7075-201ENSMUST00000184187 82 ntBASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sp140Q6NSQ5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sp140Q6NSQ5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sp140Q6NSQ5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sp140Q6NSQ5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Gm27454-201ENSMUST00000185090 204 ntBASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sp140Q6NSQ5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sp140Q6NSQ5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sp140Q6NSQ5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms