Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Krt42Q6IFX2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt42Q6IFX2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt42Q6IFX2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Krt42Q6IFX2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.83■□□□□ 0.77
Krt42Q6IFX2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.83■□□□□ 0.77
Krt42Q6IFX2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Krt42Q6IFX2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.82■□□□□ 0.76
Krt42Q6IFX2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Krt42Q6IFX2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Gm45444-201ENSMUST00000211394 898 ntBASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Krt42Q6IFX2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Krt42Q6IFX2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Krt42Q6IFX2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.78■□□□□ 0.76
Krt42Q6IFX2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Krt42Q6IFX2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Krt42Q6IFX2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Krt42Q6IFX2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Krt42Q6IFX2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Krt42Q6IFX2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms