Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav7d-3Q5R1I1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav7d-3Q5R1I1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav7d-3Q5R1I1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Gm14117-201ENSMUST00000122417 843 ntBASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav7d-3Q5R1I1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-3Q5R1I1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-3Q5R1I1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7d-3Q5R1I1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Trav7d-3Q5R1I1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trav7d-3Q5R1I1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav7d-3Q5R1I1 AA386476-201ENSMUST00000098781 1665 ntBASIC14.08□□□□□ -0.16
Trav7d-3Q5R1I1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-3Q5R1I1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
Trav7d-3Q5R1I1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-3Q5R1I1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav7d-3Q5R1I1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-3Q5R1I1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms