Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 AV356131-201ENSMUST00000206201 750 ntBASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-4Q5R1I0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Gm10849-201ENSMUST00000100397 618 ntBASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav6d-4Q5R1I0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-4Q5R1I0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-4Q5R1I0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-4Q5R1I0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Gm7291-201ENSMUST00000199147 382 ntBASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-4Q5R1I0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Gm27405-201ENSMUST00000184201 112 ntBASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-4Q5R1I0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6d-4Q5R1I0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6d-4Q5R1I0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6d-4Q5R1I0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6d-4Q5R1I0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms