Protein–RNA interactions for Protein: Q3U1F9

Pag1, Phosphoprotein associated with glycosphingolipid-enriched microdomains 1, mousemouse

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pag1Q3U1F9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pag1Q3U1F9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pag1Q3U1F9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pag1Q3U1F9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pag1Q3U1F9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pag1Q3U1F9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pag1Q3U1F9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pag1Q3U1F9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pag1Q3U1F9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Pag1Q3U1F9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pag1Q3U1F9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pag1Q3U1F9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pag1Q3U1F9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.72■□□□□ 0.59
Pag1Q3U1F9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pag1Q3U1F9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pag1Q3U1F9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.72■□□□□ 0.59
Pag1Q3U1F9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pag1Q3U1F9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.71■□□□□ 0.59
Pag1Q3U1F9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pag1Q3U1F9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pag1Q3U1F9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pag1Q3U1F9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Pag1Q3U1F9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pag1Q3U1F9 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.68■□□□□ 0.58
Pag1Q3U1F9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms