Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.84■□□□□ 0.93
Col19a1Q0VF58 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Col19a1Q0VF58 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col19a1Q0VF58 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col19a1Q0VF58 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Col19a1Q0VF58 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.82■□□□□ 0.92
Col19a1Q0VF58 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col19a1Q0VF58 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Gm7860-201ENSMUST00000121190 879 ntBASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Gm15378-201ENSMUST00000121894 207 ntBASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Col19a1Q0VF58 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Gm43799-201ENSMUST00000201845 579 ntBASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Col19a1Q0VF58 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col19a1Q0VF58 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Col19a1Q0VF58 Gm2399-201ENSMUST00000104944 225 ntBASIC20.79■□□□□ 0.92
Col19a1Q0VF58 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Col19a1Q0VF58 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.79■□□□□ 0.92
Col19a1Q0VF58 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.79■□□□□ 0.92
Col19a1Q0VF58 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Col19a1Q0VF58 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Gm6433-201ENSMUST00000118634 875 ntBASIC20.78■□□□□ 0.92
Col19a1Q0VF58 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Col19a1Q0VF58 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Col19a1Q0VF58 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col19a1Q0VF58 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Col19a1Q0VF58 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col19a1Q0VF58 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Col19a1Q0VF58 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Col19a1Q0VF58 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Mir5122-201ENSMUST00000175004 89 ntBASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Gm7367-201ENSMUST00000057611 492 ntBASIC20.75■□□□□ 0.91
Col19a1Q0VF58 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms